Package mmLib :: Module PDB :: Class MODRES
[hide private]
[frames] | no frames]

Class MODRES

source code

object --+        
         |        
      dict --+    
             |    
     PDBRecord --+
                 |
                MODRES

The MODRES record provides descriptions of modifications (e.g., chemical or post-translational) to protein and nucleic acid residues. Included are a mapping between residue names given in a PDB entry and standard residues.

Instance Methods [hide private]

Inherited from PDBRecord: __str__, read, reccat, reccat_dictlist, reccat_list, reccat_multi, reccat_tuplelist, write

Inherited from dict: __cmp__, __contains__, __delitem__, __eq__, __ge__, __getattribute__, __getitem__, __gt__, __init__, __iter__, __le__, __len__, __lt__, __ne__, __new__, __repr__, __setitem__, __sizeof__, clear, copy, fromkeys, get, has_key, items, iteritems, iterkeys, itervalues, keys, pop, popitem, setdefault, update, values

Inherited from object: __delattr__, __format__, __reduce__, __reduce_ex__, __setattr__, __subclasshook__

Class Variables [hide private]
  _name = 'MODRES'
hash(x)
  _field_list = [('idCode', 8, 11, 'string', 'rjust', None), ('r...
hash(x)

Inherited from dict: __hash__

Properties [hide private]

Inherited from object: __class__

Class Variable Details [hide private]

_field_list

hash(x)

Value:
[('idCode', 8, 11, 'string', 'rjust', None),
 ('resName', 13, 15, 'string', 'rjust', None),
 ('chainID', 17, 17, 'string', 'rjust', None),
 ('seqNum', 19, 22, 'integer', 'rjust', None),
 ('iCode', 23, 23, 'string', 'rjust', None),
 ('stdRes', 25, 27, 'string', 'rjust', None),
 ('comment', 30, 70, 'string', 'ljust', None)]