Class containing information on a protein alpha helix.
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__init__(self,
helix_id='
' ,
helix_class=' 1 ' ,
helix_length=0,
chain_id1='
' ,
frag_id1='
' ,
res_name1='
' ,
chain_id2='
' ,
frag_id2='
' ,
res_name2='
' ,
details='
' ,
**args)
x.__init__(...) initializes x; see x.__class__.__doc__ for signature |
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construct_segment(self)
Constructs the child Segment object from the Chain object found in
the parent Structure object by the AlphaHelix chain_id/fragment_id
information. |
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get_model(self)
Returns the parent Model object. |
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get_structure(self)
Returns the parent Structure object. |
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get_segment(self)
Return the child Segment object this AlphaHelix spans in the parent
Model. |
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iter_fragments(self)
Iterates all Fragment objects in the AlphaHelix. |
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iter_atoms(self)
Iterates all Atom objects in the AlphaHelix. |
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iter_all_atoms(self)
Iterates all Atom objects in all AlphaHelix, plus any in non-default
alt_loc conformations. |
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Inherited from object :
__delattr__ ,
__format__ ,
__getattribute__ ,
__hash__ ,
__new__ ,
__reduce__ ,
__reduce_ex__ ,
__repr__ ,
__setattr__ ,
__sizeof__ ,
__subclasshook__
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