Here is a list of all class members with links to the classes they belong to:
- c -
- calcDispersionCorrection()
: NonbondedForceImpl
- calcEwaldParameters()
: NonbondedForceImpl
- calcForcesAndEnergy()
: CMAPTorsionForceImpl
, CustomBondForceImpl
, GBSAOBCForceImpl
, GBVIForceImpl
, CustomCompoundBondForceImpl
, HarmonicAngleForceImpl
, HarmonicBondForceImpl
, CMMotionRemoverImpl
, CustomExternalForceImpl
, MonteCarloBarostatImpl
, NonbondedForceImpl
, CustomGBForceImpl
, PeriodicTorsionForceImpl
, RBTorsionForceImpl
, AndersenThermostatImpl
, ContextImpl
, CustomHbondForceImpl
, CustomNonbondedForceImpl
, CustomAngleForceImpl
, CustomTorsionForceImpl
, ForceImpl
- calcKineticEnergy()
: ContextImpl
- calcMapDerivatives()
: CMAPTorsionForceImpl
- calcParticleGroups()
: AndersenThermostatImpl
- calcPMEParameters()
: NonbondedForceImpl
- cleanup()
: VariableLangevinIntegrator
, VariableVerletIntegrator
, VerletIntegrator
, BrownianIntegrator
, CustomIntegrator
, Integrator
, LangevinIntegrator
- CMAPTorsionForce()
: CMAPTorsionForce
- CMAPTorsionForceImpl()
: CMAPTorsionForceImpl
- CMMotionRemover()
: CMMotionRemover
- CMMotionRemoverImpl()
: CMMotionRemoverImpl
- CollisionFrequency()
: AndersenThermostat
- ComputationType
: CustomGBForce
, CustomIntegrator
- ComputeGlobal
: CustomIntegrator
- computeKineticEnergy()
: BrownianIntegrator
, CustomIntegrator
, Integrator
, LangevinIntegrator
, VariableLangevinIntegrator
, VariableVerletIntegrator
, VerletIntegrator
- ComputePerDof
: CustomIntegrator
- ComputeSum
: CustomIntegrator
- computeVirtualSites()
: Context
, ContextImpl
- ConstrainPositions
: CustomIntegrator
- ConstrainVelocities
: CustomIntegrator
- Context
: Integrator
, ContextImpl
, State
, Context
- context
: Integrator
- contextCreated()
: Platform
- contextDestroyed()
: Platform
- ContextImpl
: Force
, Integrator
, ContextImpl
- createCheckpoint()
: Context
, ContextImpl
- createExceptionsFromBonds()
: NonbondedForce
- createImpl()
: CustomHbondForce
, PeriodicTorsionForce
, CMAPTorsionForce
, CMMotionRemover
, CustomAngleForce
, CustomCompoundBondForce
, CustomExternalForce
, CustomGBForce
, HarmonicAngleForce
, CustomNonbondedForce
, CustomTorsionForce
, Force
, HarmonicBondForce
, GBVIForce
, MonteCarloBarostat
, NonbondedForce
, RBTorsionForce
, GBSAOBCForce
, CustomBondForce
, AndersenThermostat
- createKernel()
: Platform
- createKernelImpl()
: KernelFactory
- createNaturalSpline()
: SplineFitter
- createPeriodicSpline()
: SplineFitter
- cross()
: Vec3
- CustomAngleForce()
: CustomAngleForce
- CustomAngleForceImpl()
: CustomAngleForceImpl
- CustomBondForce()
: CustomBondForce
- CustomBondForceImpl()
: CustomBondForceImpl
- CustomCompoundBondForce()
: CustomCompoundBondForce
- CustomCompoundBondForceImpl()
: CustomCompoundBondForceImpl
- CustomExternalForce()
: CustomExternalForce
- CustomExternalForceImpl()
: CustomExternalForceImpl
- CustomGBForce()
: CustomGBForce
- CustomGBForceImpl()
: CustomGBForceImpl
- CustomHbondForce()
: CustomHbondForce
- CustomHbondForceImpl()
: CustomHbondForceImpl
- CustomIntegrator()
: CustomIntegrator
- CustomNonbondedForce()
: CustomNonbondedForce
- CustomNonbondedForceImpl()
: CustomNonbondedForceImpl
- CustomTorsionForce()
: CustomTorsionForce
- CustomTorsionForceImpl()
: CustomTorsionForceImpl
- CutoffNonPeriodic
: CustomGBForce
, CustomNonbondedForce
, GBVIForce
, CustomHbondForce
, NonbondedForce
, GBSAOBCForce
- CutoffPeriodic
: CustomHbondForce
, CustomGBForce
, CustomNonbondedForce
, GBSAOBCForce
, GBVIForce
, NonbondedForce