plot2 module <folding>

This module defines the folding that may be applied to all the data sets. The x direction and y direction have their own separate sections.

{x direction: folding} <x_fold>
This determines whether the x region is folded, and if it is whether it is wrapped or reflected at each boundary.

{x direction: peak flip} <x_flip>
This determines whether folded peaks with an odd number of folds are flipped in sign.

{x direction : width} <x_width_min, x_width_value, x_width_max>
The width of the folding region. The units are the same as the region is using.

{x direction : center} <x_center_min, x_center_value, x_center_max>
The center of the folding region. The units are the same as the region is using.

{y direction: folding} <y_fold>
This determines whether the y region is folded, and if it is whether it is wrapped or reflected at each boundary.

{y direction: peak flip} <y_flip>
This determines whether folded peaks with an odd number of folds are flipped in sign.

{y direction : width} <y_width_min, y_width_value, y_width_max>
The width of the folding region. The units are the same as the region is using.

{y direction : center} <y_center_min, y_center_value, y_center_max>
The center of the folding region. The units are the same as the region is using.

{apply} <apply>
Calculate the contours and display the result. The current parameters (e.g. the region and contour levels) as defined are the ones used.

{dismiss}
Close the module (the parameters are remembered).

{help}
Display this message.

Azara help: plot2/fold / W. Boucher / azara@bioc.cam.ac.uk