National Center for Biotechnology Information
Building From MEDLINE |
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MEDLINE indexes 3300 different journals a month
Sequence containing articles routed to NCBI Backbone
Send citations to collaborators.
Is Sequence a public direct submission?
Is GenBank: Update citation, check entry, release
Is Collaborator: Inform collaborator
Is Sequence a GenBank Hold Until Published?
Update citation and release.
Enter Sequence from article.
Release as NCBI Backbone Entry.
Map citations from other databases to a common reference.
Provide important content linkage for Sequence data.
National Center for Biotechnology Information Building an Integrated Sequence Resource. |
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Convert Disparate Data Sources to a Common Representation
NCBI Backbone Nucleotide and Protein
GenBank Direct Submissions Nucleotide
EMBL Nucleotide
DDBJ Nucleotide
PIR Protein
SWISSPROT Protein
PRF Protein
PDB (Protein)
USPTO Nucleotide and Protein
dbEST Nucleotide
*Maintain Live, Real Time View
*Provide a Stable, Uniform Identifier
Map to Non-sequence Data
Citations To MEDLINE
*Organisms To Taxon
*Gene Symbols to Maps
National Center for Biotechnology Information Providing an Integrated Sequence Resource |
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Different forms for different purposes
NCBI GenBank
Nucleotide only
NCBI Backbone
GenBank Direct Submissions
EMBL
DDBJ
USPTO
Familiar "flatfile" format
NCBI Sequences
Nucleotide and Protein from all sources
ASN.1 format
ASCII indexes
Entrez
Nucleotide and Protein from all sources
MEDLINE references
Huffman compressed ASN.1 format
Binary hierarchical indexes
End user retrieveal system
Retrieval library source code in public domain
Network Entrez
Entrez on the internet
National Center for Biotechnology Information Providing an Integrated Sequence Resource |
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Retrieve Server
Email entry retrieval
Blast Server
Client/Server
dbEST Server
FTP Server
ASN.1
GenBank Flatfile