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Package pygene :: Module gene :: Class DiscreteGene |
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object
--+ |PGXmlMixin
--+ |BaseGene
--+ | DiscreteGene
Gene type with a fixed set of possible values, typically strings
Mutation behaviour is that the gene's value may spontaneously change into one of its allelesMethod Summary | |
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determines the phenotype, subject to dominance properties | |
Change the gene's value into any of the possible alleles, subject to mutation probability 'self.mutProb' | |
returns a random allele | |
Inherited from BaseGene | |
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Produce an exact copy of this gene | |
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sets attributes of tag | |
dump out this gene into parent tag | |
Inherited from PGXmlMixin | |
Dumps out the population to an open file in XML format. | |
dumps out class information | |
dumps out to xml, returning a string of the raw generated xml | |
Inherited from object | |
x.__delattr__('name') <==> del x.name | |
x.__getattribute__('name') <==> x.name | |
x.__hash__() <==> hash(x) | |
T.__new__(S, ...) -> a new object with type S, a subtype of T | |
helper for pickle | |
helper for pickle | |
x.__setattr__('name', value) <==> x.name = value | |
x.__str__() <==> str(x) |
Class Variable Summary | |
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list |
alleles = []
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list |
codominant = []
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NoneType |
dominant = None |
NoneType |
recessive = None |
Inherited from BaseGene | |
float |
mutProb = 0.01 |
NoneType |
value = None |
Method Details |
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__add__(self,
other)
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mutate(self)Change the gene's value into any of the possible alleles, subject to mutation probability 'self.mutProb' perform mutation IN-PLACE, ie don't return mutated copy
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randomValue(self)returns a random allele
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Class Variable Details |
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alleles
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codominant
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dominant
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recessive
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