Data Model version 2.0.6
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Class: Coord


    Coordinate record for StructureModel.
Attributes
Link Attributes
Attribute Methods
Link Attribute Methods
Class Methods
Factory Methods
Other Methods
Appendix

Inheritance:


Details:

Parent: link atom to class Atom
Main key: model, altLocationCode
Mandatory Attributes: model
Known Subclasses: None
Children: None
Constructor: newObj = Coord( atom,model=value, ... )

Attributes (in package)

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Attribute Type Multiplicity Description
altLocationCode Line 1..1 Alternative location code for coordinate record, serves as key for object. Default is a single space (' '). Non-default values will only come in when there are several alternative locations for a given atom.  
bFactor Float 1..1 X-ray crystallographical B-factor  
occupancy Float 1..1 Fractional occupancy of this coordinate position by the atom.  
x Float 0..1 X coordinate in Angstroms  
y Float 0..1 Y coordinate in Angstroms  
z Float 0..1 Z coordinate in Angstroms  

Inherited Attributes (not in package): applicationDataclassNamefieldNamesinConstructorisDeletedmetaclasspackageNamepackageShortNamequalifiedName

Link Attributes (in package)

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Attribute Type Multiplicity Description
atom Atom 1..1 (Parent link). parent link  
model Model 1..1 Model that coordinates belong to. Part of key for Coord  
parent Atom 1..1 link to parent object - synonym for atom  

Inherited Attributes (not in package): accessactiveAccessroottopObject

Attribute Methods (in package)

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Attribute Method Return Parameters Comment
altLocationCode
getAltLocationCode Line -
setAltLocationCode - Line
bFactor
getBFactor Float -
setBFactor - Float
occupancy
getOccupancy Float -
setOccupancy - Float
x
getX Float -
setX - Float
y
getY Float -
setY - Float
z
getZ Float -
setZ - Float

Link Attribute Methods (in package)

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Attribute Method Return Parameters Comment
atom
getAtom Atom -
model
getModel Model -
setModel - Model
parent
getParent Atom -

Class Methods (in package)

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Method Return Parameters Comment
checkValid - Boolean
checkAllValid - Boolean
getByKey Coord memops.api.Implementation.MemopsObject, Any List static
getFullKey Any List Boolean
getLocalKey Any -
get Any String
set - String, Any

Factory Methods (in package)

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Method Return Parameters
None

Other Methods (in package)

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Method Return Parameters Comment
None

Appendix

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guid:

www.ccpn.ac.uk_Fogh_2006-08-16-14:22:55_00001

isImplicit:

False

Tag

Value
repositoryId $Id: Coord.xml,v 1.48 2011-01-13 14:40:34 rhfogh Exp $

Tag

Value
repositoryTag $Name: not supported by cvs2svn $

Special constructor code:

None

Special destructor code:

None

Constraints:

None
Known inward one-way links: None
  Data Model Version 2.0.6
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  Autogenerated by  PyApiDocGen  revision 1.3   on  Wed Aug 7 15:06:38 2013    from data model package  ccp.api.molecule.MolStructure.Coord   revision 1.48  
  Work done by the CCPN team.
www.ccpn.ac.uk