Data Model version 2.0.6

Attribute: linkCode


    code ('name') for link. The following naming convention is used:
    The linkCode is the same as the name of the boundChemAtom. E.g. a cysteine disulfide link will have linkCode 'SG'. The first exception is the case where there is more than one link starting at the same atom - here the linkCodes are the name of the first linkAtom followed by '_1', '_2'. E.g. an atom CX with three links starting from it will have linkEnds with linkCodes CX_1, CX_2, CX_3. If two different atom subtypes both have a link, the linkCodes are of the same form - there are no fixed rules for how to apportion the various suffixes. Another exception is the 'prev' and 'next' that form the backbone of linear polymers.

guid: www.ccpn.ac.uk_Fogh_2006-08-16-18:23:25_00024
Model Type: Word
Implementation Type: String
Multiplicity: 1..1
Changeability: frozen
isDerived: False
isAutomatic: False
isImplementation: False
isImplicit: False
isAbstract: False
Scope: instance_level
Default Value: None
Constraints: None

Methods

Method Return Parameters Comment
getLinkCode Word -
setLinkCode - Word
  Data Model Version 2.0.6
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  Autogenerated by  PyApiDocGen  revision 1.3   on  Wed Aug 7 15:06:23 2013    from data model package  ccp.api.molecule.ChemComp.LinkEnd   revision 1.58  
  Work done by the CCPN team.
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