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Class: DangleChain


    Chain containing residues with predicted angles
Attributes
Link Attributes
Attribute Methods
Link Attribute Methods
Class Methods
Factory Methods
Other Methods
Appendix

Inheritance:


Details:

Parent: link dangleStore to class DangleStore
Main key: chain
Mandatory Attributes: chain
Known Subclasses: None
Children:
link dangleResidues to class DangleResidue
Constructor: newObj = DangleChain( dangleStore,chain=value, ... )

Attributes (in package)

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None

Inherited Attributes (not in package): applicationDataclassNamefieldNamesinConstructorisDeletedmetaclasspackageNamepackageShortNamequalifiedName

Link Attributes (in package)

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Attribute Type Multiplicity Description
chain ccp.api.molecule.MolSystem.Chain 1..1 MolSystem chain for which prediction is made  
dangleResidues DangleResidue 0..* (Child link). child link to class DangleResidue  
dangleStore DangleStore 1..1 (Parent link). parent link  
nmrConstraintStore ccp.api.nmr.NmrConstraint.NmrConstraintStore 0..1 Nmr ConstraintStore where derived angles should be stored as constraints  
parent DangleStore 1..1 link to parent object - synonym for dangleStore  
shiftList ccp.api.nmr.Nmr.ShiftList 0..1 Nmr ShiftList used as input in prediction  

Inherited Attributes (not in package): accessactiveAccessroottopObject

Attribute Methods (in package)

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Attribute Method Return Parameters Comment
None

Link Attribute Methods (in package)

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Attribute Method Return Parameters Comment
chain
getChain ccp.api.molecule.MolSystem.Chain -
setChain - ccp.api.molecule.MolSystem.Chain
dangleResidues
getDangleResidues DangleResidue Set -
sortedDangleResidues DangleResidue List -
findFirstDangleResidue DangleResidue keyword=value pairs
findAllDangleResidues DangleResidue Set keyword=value pairs
dangleStore
getDangleStore DangleStore -
nmrConstraintStore
getNmrConstraintStore ccp.api.nmr.NmrConstraint.NmrConstraintStore -
setNmrConstraintStore - ccp.api.nmr.NmrConstraint.NmrConstraintStore
parent
getParent DangleStore -
shiftList
getShiftList ccp.api.nmr.Nmr.ShiftList -
setShiftList - ccp.api.nmr.Nmr.ShiftList

Class Methods (in package)

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Method Return Parameters Comment
checkValid - Boolean
checkAllValid - Boolean
getByKey DangleChain memops.api.Implementation.MemopsObject, Any List static
getFullKey Any List Boolean
getLocalKey Any -
get Any String
set - String, Any

Factory Methods (in package)

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Method Return Parameters
newDangleResidue DangleResidue phiPsiLikelihoodMatrix, residue, ...

Other Methods (in package)

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Method Return Parameters Comment
None

Appendix

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guid:

www.ccpn.ac.uk_Fogh_2007-10-01-14:13:59_00003

isImplicit:

False

Tag

Value
repositoryId $Id: DangleChain.xml,v 1.10 2011-01-13 14:40:32 rhfogh Exp $

Tag

Value
repositoryTag $Name: not supported by cvs2svn $

Special constructor code:

None

Special destructor code:

None

Constraints:

None
Known inward one-way links: None
  Data Model Version 2.0.6
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  Autogenerated by  PyApiDocGen  revision 1.3   on  Wed Aug 7 15:07:00 2013    from data model package  cambridge.api.Dangle.DangleChain   revision 1.10  
  Work done by the CCPN team.
www.ccpn.ac.uk