cmd.select("cys1", "name CB and resn cys within %s of (name CB and resn ser)"%(7.32))
cmd.select("cys2", "name SG and resn cys within %s of (name CB and resn ser)"%(7.98))
cmd.select("cys3", "name CB and resn cys within %s of (name OG and resn ser)"%(7.21))
cmd.select("cys4", "name SG and resn cys within %s of (name OG and resn ser)"%(7.84))
cmd.select("cys5", "name CB and resn cys within %s of (name CB and resn arg)"%(8.59))
cmd.select("cys6", "name SG and resn cys within %s of (name CB and resn arg)"%(8.39))
cmd.select("cys7", "name CB and resn cys within %s of (name CD and resn arg)"%(8.27))
cmd.select("cys8", "name SG and resn cys within %s of (name CD and resn arg)"%(7.36))
cmd.select("cys9", "name CB and resn cys within %s of (name CG and resn arg)"%(8.24))
cmd.select("cys10", "name SG and resn cys within %s of (name CG and resn arg)"%(7.76))
cmd.select("cys11", "name CB and resn cys within %s of (name CZ and resn arg)"%(8.53))
cmd.select("cys12", "name SG and resn cys within %s of (name CZ and resn arg)"%(7.29))
cmd.select("cys13", "name CB and resn cys within %s of (name NE and resn arg)"%(8.91))
cmd.select("cys14", "name SG and resn cys within %s of (name NE and resn arg)"%(7.76))
cmd.select("cys15", "name CB and resn cys within %s of (name NH1 and resn arg)"%(7.33))
cmd.select("cys16", "name SG and resn cys within %s of (name NH1 and resn arg)"%(6.18))
cmd.select("cys17", "name CB and resn cys within %s of (name NH2 and resn arg)"%(9.56))
cmd.select("cys18", "name SG and resn cys within %s of (name NH2 and resn arg)"%(8.22))
cmd.select("cys","byres cys18 and byres cys17 and byres cys16 and byres cys15 and byres cys14 and byres cys13 and byres cys12 and byres cys11 and byres cys10 and byres cys9 and byres cys8 and byres cys7 and byres cys6 and byres cys5 and byres cys4 and byres cys3 and byres cys2 and byres cys1")
cmd.delete("cys1")
cmd.delete("cys2")
cmd.delete("cys3")
cmd.delete("cys4")
cmd.delete("cys5")
cmd.delete("cys6")
cmd.delete("cys7")
cmd.delete("cys8")
cmd.delete("cys9")
cmd.delete("cys10")
cmd.delete("cys11")
cmd.delete("cys12")
cmd.delete("cys13")
cmd.delete("cys14")
cmd.delete("cys15")
cmd.delete("cys16")
cmd.delete("cys17")
cmd.delete("cys18")
cmd.select("ser1", "name CB and resn ser within %s of (name CB and cys)"%(7.32))
cmd.select("ser2", "name OG and resn ser within %s of (name CB and cys)"%(7.21))
cmd.select("ser3", "name CB and resn ser within %s of (name SG and cys)"%(7.98))
cmd.select("ser4", "name OG and resn ser within %s of (name SG and cys)"%(7.84))
cmd.select("ser5", "name CB and resn ser within %s of (name CB and resn cys)"%(8.5))
cmd.select("ser6", "name OG and resn ser within %s of (name CB and resn cys)"%(8.43))
cmd.select("ser7", "name CB and resn ser within %s of (name SG and resn cys)"%(8.6))
cmd.select("ser8", "name OG and resn ser within %s of (name SG and resn cys)"%(8.31))
cmd.select("ser9", "name CB and resn ser within %s of (name CB and resn arg)"%(12.8))
cmd.select("ser10", "name OG and resn ser within %s of (name CB and resn arg)"%(12.08))
cmd.select("ser11", "name CB and resn ser within %s of (name CD and resn arg)"%(12.22))
cmd.select("ser12", "name OG and resn ser within %s of (name CD and resn arg)"%(11.55))
cmd.select("ser13", "name CB and resn ser within %s of (name CG and resn arg)"%(12.1))
cmd.select("ser14", "name OG and resn ser within %s of (name CG and resn arg)"%(11.29))
cmd.select("ser15", "name CB and resn ser within %s of (name CZ and resn arg)"%(11.4))
cmd.select("ser16", "name OG and resn ser within %s of (name CZ and resn arg)"%(10.65))
cmd.select("ser17", "name CB and resn ser within %s of (name NE and resn arg)"%(12.33))
cmd.select("ser18", "name OG and resn ser within %s of (name NE and resn arg)"%(11.6))
cmd.select("ser19", "name CB and resn ser within %s of (name NH1 and resn arg)"%(10.11))
cmd.select("ser20", "name OG and resn ser within %s of (name NH1 and resn arg)"%(9.36))
cmd.select("ser21", "name CB and resn ser within %s of (name NH2 and resn arg)"%(11.91))
cmd.select("ser22", "name OG and resn ser within %s of (name NH2 and resn arg)"%(11.13))
cmd.select("ser","byres ser22 and byres ser21 and byres ser20 and byres ser19 and byres ser18 and byres ser17 and byres ser16 and byres ser15 and byres ser14 and byres ser13 and byres ser12 and byres ser11 and byres ser10 and byres ser9 and byres ser8 and byres ser7 and byres ser6 and byres ser5 and byres ser4 and byres ser3 and byres ser2 and byres ser1")
cmd.delete("ser1")
cmd.delete("ser2")
cmd.delete("ser3")
cmd.delete("ser4")
cmd.delete("ser5")
cmd.delete("ser6")
cmd.delete("ser7")
cmd.delete("ser8")
cmd.delete("ser9")
cmd.delete("ser10")
cmd.delete("ser11")
cmd.delete("ser12")
cmd.delete("ser13")
cmd.delete("ser14")
cmd.delete("ser15")
cmd.delete("ser16")
cmd.delete("ser17")
cmd.delete("ser18")
cmd.delete("ser19")
cmd.delete("ser20")
cmd.delete("ser21")
cmd.delete("ser22")
cmd.select("cys1", "name CB and resn cys within %s of (name CB and ser)"%(8.5))
cmd.select("cys2", "name SG and resn cys within %s of (name CB and ser)"%(8.6))
cmd.select("cys3", "name CB and resn cys within %s of (name OG and ser)"%(8.43))
cmd.select("cys4", "name SG and resn cys within %s of (name OG and ser)"%(8.31))
cmd.select("cys5", "name CB and resn cys within %s of (name CB and resn arg)"%(11.7))
cmd.select("cys6", "name SG and resn cys within %s of (name CB and resn arg)"%(9.92))
cmd.select("cys7", "name CB and resn cys within %s of (name CD and resn arg)"%(9.78))
cmd.select("cys8", "name SG and resn cys within %s of (name CD and resn arg)"%(8.02))
cmd.select("cys9", "name CB and resn cys within %s of (name CG and resn arg)"%(10.51))
cmd.select("cys10", "name SG and resn cys within %s of (name CG and resn arg)"%(8.75))
cmd.select("cys11", "name CB and resn cys within %s of (name CZ and resn arg)"%(8.06))
cmd.select("cys12", "name SG and resn cys within %s of (name CZ and resn arg)"%(6.48))
cmd.select("cys13", "name CB and resn cys within %s of (name NE and resn arg)"%(9.17))
cmd.select("cys14", "name SG and resn cys within %s of (name NE and resn arg)"%(7.53))
cmd.select("cys15", "name CB and resn cys within %s of (name NH1 and resn arg)"%(7.37))
cmd.select("cys16", "name SG and resn cys within %s of (name NH1 and resn arg)"%(5.69))
cmd.select("cys17", "name CB and resn cys within %s of (name NH2 and resn arg)"%(7.95))
cmd.select("cys18", "name SG and resn cys within %s of (name NH2 and resn arg)"%(6.66))
cmd.select("cys","byres cys18 and byres cys17 and byres cys16 and byres cys15 and byres cys14 and byres cys13 and byres cys12 and byres cys11 and byres cys10 and byres cys9 and byres cys8 and byres cys7 and byres cys6 and byres cys5 and byres cys4 and byres cys3 and byres cys2 and byres cys1")
cmd.delete("cys1")
cmd.delete("cys2")
cmd.delete("cys3")
cmd.delete("cys4")
cmd.delete("cys5")
cmd.delete("cys6")
cmd.delete("cys7")
cmd.delete("cys8")
cmd.delete("cys9")
cmd.delete("cys10")
cmd.delete("cys11")
cmd.delete("cys12")
cmd.delete("cys13")
cmd.delete("cys14")
cmd.delete("cys15")
cmd.delete("cys16")
cmd.delete("cys17")
cmd.delete("cys18")
cmd.select("arg1", "name CB and resn arg within %s of (name CB and cys)"%(8.59))
cmd.select("arg2", "name CD and resn arg within %s of (name CB and cys)"%(8.27))
cmd.select("arg3", "name CG and resn arg within %s of (name CB and cys)"%(8.24))
cmd.select("arg4", "name CZ and resn arg within %s of (name CB and cys)"%(8.53))
cmd.select("arg5", "name NE and resn arg within %s of (name CB and cys)"%(8.91))
cmd.select("arg6", "name NH1 and resn arg within %s of (name CB and cys)"%(7.33))
cmd.select("arg7", "name NH2 and resn arg within %s of (name CB and cys)"%(9.56))
cmd.select("arg8", "name CB and resn arg within %s of (name SG and cys)"%(8.39))
cmd.select("arg9", "name CD and resn arg within %s of (name SG and cys)"%(7.36))
cmd.select("arg10", "name CG and resn arg within %s of (name SG and cys)"%(7.76))
cmd.select("arg11", "name CZ and resn arg within %s of (name SG and cys)"%(7.29))
cmd.select("arg12", "name NE and resn arg within %s of (name SG and cys)"%(7.76))
cmd.select("arg13", "name NH1 and resn arg within %s of (name SG and cys)"%(6.18))
cmd.select("arg14", "name NH2 and resn arg within %s of (name SG and cys)"%(8.22))
cmd.select("arg15", "name CB and resn arg within %s of (name CB and ser)"%(12.8))
cmd.select("arg16", "name CD and resn arg within %s of (name CB and ser)"%(12.22))
cmd.select("arg17", "name CG and resn arg within %s of (name CB and ser)"%(12.1))
cmd.select("arg18", "name CZ and resn arg within %s of (name CB and ser)"%(11.4))
cmd.select("arg19", "name NE and resn arg within %s of (name CB and ser)"%(12.33))
cmd.select("arg20", "name NH1 and resn arg within %s of (name CB and ser)"%(10.11))
cmd.select("arg21", "name NH2 and resn arg within %s of (name CB and ser)"%(11.91))
cmd.select("arg22", "name CB and resn arg within %s of (name OG and ser)"%(12.08))
cmd.select("arg23", "name CD and resn arg within %s of (name OG and ser)"%(11.55))
cmd.select("arg24", "name CG and resn arg within %s of (name OG and ser)"%(11.29))
cmd.select("arg25", "name CZ and resn arg within %s of (name OG and ser)"%(10.65))
cmd.select("arg26", "name NE and resn arg within %s of (name OG and ser)"%(11.6))
cmd.select("arg27", "name NH1 and resn arg within %s of (name OG and ser)"%(9.36))
cmd.select("arg28", "name NH2 and resn arg within %s of (name OG and ser)"%(11.13))
cmd.select("arg29", "name CB and resn arg within %s of (name CB and cys)"%(11.7))
cmd.select("arg30", "name CD and resn arg within %s of (name CB and cys)"%(9.78))
cmd.select("arg31", "name CG and resn arg within %s of (name CB and cys)"%(10.51))
cmd.select("arg32", "name CZ and resn arg within %s of (name CB and cys)"%(8.06))
cmd.select("arg33", "name NE and resn arg within %s of (name CB and cys)"%(9.17))
cmd.select("arg34", "name NH1 and resn arg within %s of (name CB and cys)"%(7.37))
cmd.select("arg35", "name NH2 and resn arg within %s of (name CB and cys)"%(7.95))
cmd.select("arg36", "name CB and resn arg within %s of (name SG and cys)"%(9.92))
cmd.select("arg37", "name CD and resn arg within %s of (name SG and cys)"%(8.02))
cmd.select("arg38", "name CG and resn arg within %s of (name SG and cys)"%(8.75))
cmd.select("arg39", "name CZ and resn arg within %s of (name SG and cys)"%(6.48))
cmd.select("arg40", "name NE and resn arg within %s of (name SG and cys)"%(7.53))
cmd.select("arg41", "name NH1 and resn arg within %s of (name SG and cys)"%(5.69))
cmd.select("arg42", "name NH2 and resn arg within %s of (name SG and cys)"%(6.66))
cmd.select("arg","byres arg42 and byres arg41 and byres arg40 and byres arg39 and byres arg38 and byres arg37 and byres arg36 and byres arg35 and byres arg34 and byres arg33 and byres arg32 and byres arg31 and byres arg30 and byres arg29 and byres arg28 and byres arg27 and byres arg26 and byres arg25 and byres arg24 and byres arg23 and byres arg22 and byres arg21 and byres arg20 and byres arg19 and byres arg18 and byres arg17 and byres arg16 and byres arg15 and byres arg14 and byres arg13 and byres arg12 and byres arg11 and byres arg10 and byres arg9 and byres arg8 and byres arg7 and byres arg6 and byres arg5 and byres arg4 and byres arg3 and byres arg2 and byres arg1")
cmd.delete("arg1")
cmd.delete("arg2")
cmd.delete("arg3")
cmd.delete("arg4")
cmd.delete("arg5")
cmd.delete("arg6")
cmd.delete("arg7")
cmd.delete("arg8")
cmd.delete("arg9")
cmd.delete("arg10")
cmd.delete("arg11")
cmd.delete("arg12")
cmd.delete("arg13")
cmd.delete("arg14")
cmd.delete("arg15")
cmd.delete("arg16")
cmd.delete("arg17")
cmd.delete("arg18")
cmd.delete("arg19")
cmd.delete("arg20")
cmd.delete("arg21")
cmd.delete("arg22")
cmd.delete("arg23")
cmd.delete("arg24")
cmd.delete("arg25")
cmd.delete("arg26")
cmd.delete("arg27")
cmd.delete("arg28")
cmd.delete("arg29")
cmd.delete("arg30")
cmd.delete("arg31")
cmd.delete("arg32")
cmd.delete("arg33")
cmd.delete("arg34")
cmd.delete("arg35")
cmd.delete("arg36")
cmd.delete("arg37")
cmd.delete("arg38")
cmd.delete("arg39")
cmd.delete("arg40")
cmd.delete("arg41")
cmd.delete("arg42")
cmd.select("Motif","cys(ser(cys(arg)))")
cmd.delete('cys')
cmd.delete('seri')
cmd.delete('cysii')
cmd.delete('argiii')
cmd.hide("everything","all")
cmd.show("cartoon", "all")
cmd.set("cartoon_transparency","0.5", "all")
cmd.show("sticks","Motif")
cmd.color("grey","all")
cmd.color("oxygen","(elem O and Motif)")
cmd.color("nitrogen","(elem N and Motif)")
cmd.color("sulfur","(elem S and Motif)")
cmd.color("hydrogen","(elem H and Motif)")
cmd.color("white","(elem C and Motif)")
cmd.deselect()
cmd.orient("Motif")
