cmd.select("gln1", "name CB and resn gln within %s of (name CB and resn cys )"%(7.86))
cmd.select("gln2", "name CD and resn gln within %s of (name CB and resn cys )"%(5.91))
cmd.select("gln3", "name CG and resn gln within %s of (name CB and resn cys )"%(7.26))
cmd.select("gln4", "name NE2 and resn gln within %s of (name CB and resn cys )"%(5.21))
cmd.select("gln5", "name OE1 and resn gln within %s of (name CB and resn cys )"%(5.86))
cmd.select("gln6", "name CB and resn gln within %s of (name SG and resn cys )"%(9.42))
cmd.select("gln7", "name CD and resn gln within %s of (name SG and resn cys )"%(7.15))
cmd.select("gln8", "name CG and resn gln within %s of (name SG and resn cys )"%(8.57))
cmd.select("gln9", "name NE2 and resn gln within %s of (name SG and resn cys )"%(6.76))
cmd.select("gln10", "name OE1 and resn gln within %s of (name SG and resn cys )"%(6.65))
cmd.select("gln11", "name CB and resn gln within %s of (name CB and resn his )"%(11.67))
cmd.select("gln12", "name CD and resn gln within %s of (name CB and resn his )"%(9.74))
cmd.select("gln13", "name CG and resn gln within %s of (name CB and resn his )"%(11.17))
cmd.select("gln14", "name NE2 and resn gln within %s of (name CB and resn his )"%(9.14))
cmd.select("gln15", "name OE1 and resn gln within %s of (name CB and resn his )"%(9.28))
cmd.select("gln16", "name CB and resn gln within %s of (name CD2 and resn his )"%(10.31))
cmd.select("gln17", "name CD and resn gln within %s of (name CD2 and resn his )"%(8.92))
cmd.select("gln18", "name CG and resn gln within %s of (name CD2 and resn his )"%(10.21))
cmd.select("gln19", "name NE2 and resn gln within %s of (name CD2 and resn his )"%(8.04))
cmd.select("gln20", "name OE1 and resn gln within %s of (name CD2 and resn his )"%(8.89))
cmd.select("gln21", "name CB and resn gln within %s of (name CE1 and resn his )"%(8.22))
cmd.select("gln22", "name CD and resn gln within %s of (name CE1 and resn his )"%(6.74))
cmd.select("gln23", "name CG and resn gln within %s of (name CE1 and resn his )"%(8.03))
cmd.select("gln24", "name NE2 and resn gln within %s of (name CE1 and resn his )"%(5.89))
cmd.select("gln25", "name OE1 and resn gln within %s of (name CE1 and resn his )"%(6.77))
cmd.select("gln26", "name CB and resn gln within %s of (name CG and resn his )"%(10.36))
cmd.select("gln27", "name CD and resn gln within %s of (name CG and resn his )"%(8.62))
cmd.select("gln28", "name CG and resn gln within %s of (name CG and resn his )"%(10.01))
cmd.select("gln29", "name NE2 and resn gln within %s of (name CG and resn his )"%(7.91))
cmd.select("gln30", "name OE1 and resn gln within %s of (name CG and resn his )"%(8.35))
cmd.select("gln31", "name CB and resn gln within %s of (name ND1 and resn his )"%(9.11))
cmd.select("gln32", "name CD and resn gln within %s of (name ND1 and resn his )"%(7.27))
cmd.select("gln33", "name CG and resn gln within %s of (name ND1 and resn his )"%(8.67))
cmd.select("gln34", "name NE2 and resn gln within %s of (name ND1 and resn his )"%(6.62))
cmd.select("gln35", "name OE1 and resn gln within %s of (name ND1 and resn his )"%(6.98))
cmd.select("gln36", "name CB and resn gln within %s of (name NE2 and resn his )"%(9.03))
cmd.select("gln37", "name CD and resn gln within %s of (name NE2 and resn his )"%(7.88))
cmd.select("gln38", "name CG and resn gln within %s of (name NE2 and resn his )"%(9.07))
cmd.select("gln39", "name NE2 and resn gln within %s of (name NE2 and resn his )"%(6.91))
cmd.select("gln40", "name OE1 and resn gln within %s of (name NE2 and resn his )"%(8.04))
cmd.select("gln","byres gln40 and byres gln39 and byres gln38 and byres gln37 and byres gln36 and byres gln35 and byres gln34 and byres gln33 and byres gln32 and byres gln31 and byres gln30 and byres gln29 and byres gln28 and byres gln27 and byres gln26 and byres gln25 and byres gln24 and byres gln23 and byres gln22 and byres gln21 and byres gln20 and byres gln19 and byres gln18 and byres gln17 and byres gln16 and byres gln15 and byres gln14 and byres gln13 and byres gln12 and byres gln11 and byres gln10 and byres gln9 and byres gln8 and byres gln7 and byres gln6 and byres gln5 and byres gln4 and byres gln3 and byres gln2 and byres gln1")
cmd.delete("gln1")
cmd.delete("gln2")
cmd.delete("gln3")
cmd.delete("gln4")
cmd.delete("gln5")
cmd.delete("gln6")
cmd.delete("gln7")
cmd.delete("gln8")
cmd.delete("gln9")
cmd.delete("gln10")
cmd.delete("gln11")
cmd.delete("gln12")
cmd.delete("gln13")
cmd.delete("gln14")
cmd.delete("gln15")
cmd.delete("gln16")
cmd.delete("gln17")
cmd.delete("gln18")
cmd.delete("gln19")
cmd.delete("gln20")
cmd.delete("gln21")
cmd.delete("gln22")
cmd.delete("gln23")
cmd.delete("gln24")
cmd.delete("gln25")
cmd.delete("gln26")
cmd.delete("gln27")
cmd.delete("gln28")
cmd.delete("gln29")
cmd.delete("gln30")
cmd.delete("gln31")
cmd.delete("gln32")
cmd.delete("gln33")
cmd.delete("gln34")
cmd.delete("gln35")
cmd.delete("gln36")
cmd.delete("gln37")
cmd.delete("gln38")
cmd.delete("gln39")
cmd.delete("gln40")
cmd.select("cys1", "name CB and resn cys within %s of (name CB and gln )"%(7.86))
cmd.select("cys2", "name SG and resn cys within %s of (name CB and gln )"%(9.42))
cmd.select("cys3", "name CB and resn cys within %s of (name CD and gln )"%(5.91))
cmd.select("cys4", "name SG and resn cys within %s of (name CD and gln )"%(7.15))
cmd.select("cys5", "name CB and resn cys within %s of (name CG and gln )"%(7.26))
cmd.select("cys6", "name SG and resn cys within %s of (name CG and gln )"%(8.57))
cmd.select("cys7", "name CB and resn cys within %s of (name NE2 and gln )"%(5.21))
cmd.select("cys8", "name SG and resn cys within %s of (name NE2 and gln )"%(6.76))
cmd.select("cys9", "name CB and resn cys within %s of (name OE1 and gln )"%(5.86))
cmd.select("cys10", "name SG and resn cys within %s of (name OE1 and gln )"%(6.65))
cmd.select("cys11", "name CB and resn cys within %s of (name CB and resn his )"%(7.59))
cmd.select("cys12", "name SG and resn cys within %s of (name CB and resn his )"%(7.01))
cmd.select("cys13", "name CB and resn cys within %s of (name CD2 and resn his )"%(7.25))
cmd.select("cys14", "name SG and resn cys within %s of (name CD2 and resn his )"%(7.56))
cmd.select("cys15", "name CB and resn cys within %s of (name CE1 and resn his )"%(5.7))
cmd.select("cys16", "name SG and resn cys within %s of (name CE1 and resn his )"%(6.43))
cmd.select("cys17", "name CB and resn cys within %s of (name CG and resn his )"%(6.75))
cmd.select("cys18", "name SG and resn cys within %s of (name CG and resn his )"%(6.67))
cmd.select("cys19", "name CB and resn cys within %s of (name ND1 and resn his )"%(5.73))
cmd.select("cys20", "name SG and resn cys within %s of (name ND1 and resn his )"%(5.87))
cmd.select("cys21", "name CB and resn cys within %s of (name NE2 and resn his )"%(6.7))
cmd.select("cys22", "name SG and resn cys within %s of (name NE2 and resn his )"%(7.45))
cmd.select("cys","byres cys22 and byres cys21 and byres cys20 and byres cys19 and byres cys18 and byres cys17 and byres cys16 and byres cys15 and byres cys14 and byres cys13 and byres cys12 and byres cys11 and byres cys10 and byres cys9 and byres cys8 and byres cys7 and byres cys6 and byres cys5 and byres cys4 and byres cys3 and byres cys2 and byres cys1")
cmd.delete("cys1")
cmd.delete("cys2")
cmd.delete("cys3")
cmd.delete("cys4")
cmd.delete("cys5")
cmd.delete("cys6")
cmd.delete("cys7")
cmd.delete("cys8")
cmd.delete("cys9")
cmd.delete("cys10")
cmd.delete("cys11")
cmd.delete("cys12")
cmd.delete("cys13")
cmd.delete("cys14")
cmd.delete("cys15")
cmd.delete("cys16")
cmd.delete("cys17")
cmd.delete("cys18")
cmd.delete("cys19")
cmd.delete("cys20")
cmd.delete("cys21")
cmd.delete("cys22")
cmd.select("his1", "name CB and resn his within %s of (name CB and gln )"%(11.67))
cmd.select("his2", "name CD2 and resn his within %s of (name CB and gln )"%(10.31))
cmd.select("his3", "name CE1 and resn his within %s of (name CB and gln )"%(8.22))
cmd.select("his4", "name CG and resn his within %s of (name CB and gln )"%(10.36))
cmd.select("his5", "name ND1 and resn his within %s of (name CB and gln )"%(9.11))
cmd.select("his6", "name NE2 and resn his within %s of (name CB and gln )"%(9.03))
cmd.select("his7", "name CB and resn his within %s of (name CD and gln )"%(9.74))
cmd.select("his8", "name CD2 and resn his within %s of (name CD and gln )"%(8.92))
cmd.select("his9", "name CE1 and resn his within %s of (name CD and gln )"%(6.74))
cmd.select("his10", "name CG and resn his within %s of (name CD and gln )"%(8.62))
cmd.select("his11", "name ND1 and resn his within %s of (name CD and gln )"%(7.27))
cmd.select("his12", "name NE2 and resn his within %s of (name CD and gln )"%(7.88))
cmd.select("his13", "name CB and resn his within %s of (name CG and gln )"%(11.17))
cmd.select("his14", "name CD2 and resn his within %s of (name CG and gln )"%(10.21))
cmd.select("his15", "name CE1 and resn his within %s of (name CG and gln )"%(8.03))
cmd.select("his16", "name CG and resn his within %s of (name CG and gln )"%(10.01))
cmd.select("his17", "name ND1 and resn his within %s of (name CG and gln )"%(8.67))
cmd.select("his18", "name NE2 and resn his within %s of (name CG and gln )"%(9.07))
cmd.select("his19", "name CB and resn his within %s of (name NE2 and gln )"%(9.14))
cmd.select("his20", "name CD2 and resn his within %s of (name NE2 and gln )"%(8.04))
cmd.select("his21", "name CE1 and resn his within %s of (name NE2 and gln )"%(5.89))
cmd.select("his22", "name CG and resn his within %s of (name NE2 and gln )"%(7.91))
cmd.select("his23", "name ND1 and resn his within %s of (name NE2 and gln )"%(6.62))
cmd.select("his24", "name NE2 and resn his within %s of (name NE2 and gln )"%(6.91))
cmd.select("his25", "name CB and resn his within %s of (name OE1 and gln )"%(9.28))
cmd.select("his26", "name CD2 and resn his within %s of (name OE1 and gln )"%(8.89))
cmd.select("his27", "name CE1 and resn his within %s of (name OE1 and gln )"%(6.77))
cmd.select("his28", "name CG and resn his within %s of (name OE1 and gln )"%(8.35))
cmd.select("his29", "name ND1 and resn his within %s of (name OE1 and gln )"%(6.98))
cmd.select("his30", "name NE2 and resn his within %s of (name OE1 and gln )"%(8.04))
cmd.select("his31", "name CB and resn his within %s of (name CB and cys )"%(7.59))
cmd.select("his32", "name CD2 and resn his within %s of (name CB and cys )"%(7.25))
cmd.select("his33", "name CE1 and resn his within %s of (name CB and cys )"%(5.7))
cmd.select("his34", "name CG and resn his within %s of (name CB and cys )"%(6.75))
cmd.select("his35", "name ND1 and resn his within %s of (name CB and cys )"%(5.73))
cmd.select("his36", "name NE2 and resn his within %s of (name CB and cys )"%(6.7))
cmd.select("his37", "name CB and resn his within %s of (name SG and cys )"%(7.01))
cmd.select("his38", "name CD2 and resn his within %s of (name SG and cys )"%(7.56))
cmd.select("his39", "name CE1 and resn his within %s of (name SG and cys )"%(6.43))
cmd.select("his40", "name CG and resn his within %s of (name SG and cys )"%(6.67))
cmd.select("his41", "name ND1 and resn his within %s of (name SG and cys )"%(5.87))
cmd.select("his42", "name NE2 and resn his within %s of (name SG and cys )"%(7.45))
cmd.select("his","byres his42 and byres his41 and byres his40 and byres his39 and byres his38 and byres his37 and byres his36 and byres his35 and byres his34 and byres his33 and byres his32 and byres his31 and byres his30 and byres his29 and byres his28 and byres his27 and byres his26 and byres his25 and byres his24 and byres his23 and byres his22 and byres his21 and byres his20 and byres his19 and byres his18 and byres his17 and byres his16 and byres his15 and byres his14 and byres his13 and byres his12 and byres his11 and byres his10 and byres his9 and byres his8 and byres his7 and byres his6 and byres his5 and byres his4 and byres his3 and byres his2 and byres his1")
cmd.delete("his1")
cmd.delete("his2")
cmd.delete("his3")
cmd.delete("his4")
cmd.delete("his5")
cmd.delete("his6")
cmd.delete("his7")
cmd.delete("his8")
cmd.delete("his9")
cmd.delete("his10")
cmd.delete("his11")
cmd.delete("his12")
cmd.delete("his13")
cmd.delete("his14")
cmd.delete("his15")
cmd.delete("his16")
cmd.delete("his17")
cmd.delete("his18")
cmd.delete("his19")
cmd.delete("his20")
cmd.delete("his21")
cmd.delete("his22")
cmd.delete("his23")
cmd.delete("his24")
cmd.delete("his25")
cmd.delete("his26")
cmd.delete("his27")
cmd.delete("his28")
cmd.delete("his29")
cmd.delete("his30")
cmd.delete("his31")
cmd.delete("his32")
cmd.delete("his33")
cmd.delete("his34")
cmd.delete("his35")
cmd.delete("his36")
cmd.delete("his37")
cmd.delete("his38")
cmd.delete("his39")
cmd.delete("his40")
cmd.delete("his41")
cmd.delete("his42")
cmd.select("Motif","gln(cys(his))")
cmd.delete('gln')
cmd.delete('cys')
cmd.delete('his')
cmd.hide("everything","all")
cmd.show("cartoon", "all")
cmd.set("cartoon_transparency","0.5", "all")
cmd.show("sticks","Motif")
cmd.color("grey","all")
cmd.color("oxygen","(elem O and Motif)")
cmd.color("nitrogen","(elem N and Motif)")
cmd.color("sulfur","(elem S and Motif)")
cmd.color("hydrogen","(elem H and Motif)")
cmd.color("white","(elem C and Motif)")
cmd.deselect()
cmd.orient("Motif")
